Natasha Tahir is a PhD candidate in Toxicology at Leiden University. Her research focuses on understanding human variability in toxicological responses using freshly isolated peripheral blood mononuclear cells (PBMCs). By combining high-content imaging, transcriptomics and benchmark dose modelling, she investigates biological factors that contribute to interindividual differences in susceptibility across multiple cellular stress pathways.
Her PhD project is part of an EFSA-funded international collaboration aimed at improving the incorporation of human variability into chemical risk assessment. The project integrates experimental toxicology in freshly isolated PBMCs from a cohort of 200 healthy donors spanning different age, sex and ancestry groups with computational population modelling, in collaboration with the Centre for Human Drug Research (CHDR) and Certara.
She generates and analyses high-content imaging and whole-transcriptome data from in vitro PBMC experiments, integrating these datasets using quantitative approaches to investigate biological drivers of variability in cellular responses to chemical stressors. This work supports the development of more predictive, data-driven frameworks for characterizing human diversity in responses to chemicals and advance personalized approaches for chemical safety assessment.
Presentation: Characterizing Inter-individual Variability in Human Stress Responses Using Functional and Transcriptomic Profiling of PBMCS
Aims
Understanding inter-individual variability in human cellular stress responses is critical for improving chemical safety assessment. Current approaches, including animal studies and standardized in vitro cell systems, do not fully capture the range of human responses, which are influenced by factors such as sex, age, and genetic background. Therefore, this study aims to characterize human variability in cellular responses across a large human cohort, linking functional outcomes to underlying molecular mechanisms, and to identify patterns of sensitivity and resilience within the population.
Methods
Peripheral blood mononuclear cells (PBMCs) were isolated from 200 healthy donors of diverse age groups, sexes, and ethnic backgrounds. Cells were exposed to a panel of mechanistically diverse chemical compounds targeting key stress pathways, including DNA damage, ER stress, oxidative stress, and inflammation. Functional responses, including cell death and mitochondrial function, were measured using high-content imaging. For a subset of donors, transcriptomic profiling with TempO-Seq was performed to connect functional outcomes with pathway-specific gene expression changes. Inter-individual variability was analyzed across donor groups to assess the influence of sex, age, and ethnicity on cellular responses.
Results / Conclusions
Functional imaging revealed clear, concentration-dependent cellular responses. For DNA damage, cell death responses were highly consistent across donors, showing minimal inter-individual variation. In contrast, compounds targeting ER stress elicited pronounced differences between donors, highlighting pathways were variability is most evident. Preliminary transcriptomic analysis in a subset of donors confirmed that observed functional differences corresponded to differential pathway activation, providing mechanistic insight into inter-individual variability. Across the 200-donor cohort, no major differences were observed between sexes, while trends with age and ethnic background suggest potential sources of variability, although some groups remain underrepresented. These findings demonstrate the value of integrating functional and transcriptomic data to capture human variability, identify sensitive and resilient individuals, and support more quantitative, mechanism-based risk assessment. Ongoing recruitment and future transcriptomic profiling will further enhance understanding of population-level variability and strengthen the basis for human-relevant safety evaluation.
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